Commit 7854c5bf authored by Gael's avatar Gael
Browse files

bug solved in fun_gg_boxplot()

parent 24d1b674
......@@ -9796,7 +9796,7 @@ tempo.gg.name <- "gg.indiv.plot."
tempo.gg.count <- 0
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), eval(parse(text = paste0("ggplot2::ggplot()", if(is.null(add)){""}else{add})))) # add added here to have the facets
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::geom_point(data = data1, mapping = ggplot2::aes_string(x = categ[1], y = y, color = categ[1]), stroke = dot.border.size, size = dot.size, alpha = dot.alpha, shape = 21))
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::scale_discrete_manual(aesthetics = "color", name = box.legend.name, values = if(is.null(dot.color)){rep(NA, length(unique(data1[, categ[1]])))}else if(length(dot.color) == 1){rep(dot.color, length(unique(data1[, categ[1]])))}else{dot.color}))
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::scale_discrete_manual(aesthetics = "color", name = box.legend.name, values = if(is.null(categ.color)){rep(NA, length(unique(data1[, categ[1]])))}else if(length(categ.color) == 1){rep(categ.color, length(unique(data1[, categ[1]])))}else{categ.color})) # categ.color used for dot colors because at that stage, we do not care about colors
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::geom_boxplot(data = data1, mapping = ggplot2::aes_string(x = categ[1], y = y, fill = categ[1]), coef = if(box.whisker.kind == "no"){0}else if(box.whisker.kind == "std"){1.5}else if(box.whisker.kind == "max"){Inf})) # fill because this is what is used with geom_box # to easily have the equivalent of the grouped boxes
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::scale_discrete_manual(aesthetics = "fill", name = box.legend.name, values = if(length(categ.color) == 1){rep(categ.color, length(unique(data1[, categ[1]])))}else{categ.color}))
# end per box dots coordinates recovery
......@@ -9814,7 +9814,7 @@ tempo.gg.name <- "gg.indiv.plot."
tempo.gg.count <- 0
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), eval(parse(text = paste0("ggplot2::ggplot()", if(is.null(add)){""}else{add})))) # add added here to have the facets
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::geom_point(data = data1, mapping = ggplot2::aes_string(x = categ[1], y = y, color = categ[2]), stroke = dot.border.size, size = dot.size, alpha = dot.alpha, shape = 21))
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::scale_discrete_manual(aesthetics = "color", name = box.legend.name, values = if(is.null(dot.color)){rep(NA, length(unique(data1[, categ[2]])))}else if(length(dot.color) == 1){rep(dot.color, length(unique(data1[, categ[2]])))}else{dot.color}))
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::scale_discrete_manual(aesthetics = "color", name = box.legend.name, values = if(is.null(categ.color)){rep(NA, length(unique(data1[, categ[2]])))}else if(length(categ.color) == 1){rep(categ.color, length(unique(data1[, categ[2]])))}else{categ.color})) # categ.color used for dot colors because at that stage, we do not care about colors
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::geom_boxplot(data = data1, mapping = ggplot2::aes_string(x = categ[1], y = y, fill = categ[2]), coef = if(box.whisker.kind == "no"){0}else if(box.whisker.kind == "std"){1.5}else if(box.whisker.kind == "max"){Inf})) # fill because this is what is used with geom_box # to easily have the equivalent of the grouped boxes
assign(paste0(tempo.gg.name, tempo.gg.count <- tempo.gg.count + 1), ggplot2::scale_discrete_manual(aesthetics = "fill", name = box.legend.name, values = if(length(categ.color) == 1){rep(categ.color, length(unique(data1[, categ[2]])))}else{categ.color}))
# end per box dots coordinates recovery
......
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