Commit a99d1750 authored by Gael  MILLOT's avatar Gael MILLOT
Browse files

release v8.7: python dockerfiles added

parent c2349f58
......@@ -71,6 +71,12 @@ Hub-CDB Institut Pasteur & DSI Institut Pasteur
Use the gitlab tag of the docker image (e.g., gitlab_v5.0) to get the description of the modifications below
### v8.7
Dockerfiles added: <br />
python\v3.9.10\extended\v3.1 at date 20220504: from gmillot/python_v3.9.10_extended_v2.0:gitlab_v8.4 with cyvcf2 and scipy package added
### v8.6
Dockerfiles added: <br />
......
#########################################################################
## ##
## Dockerfile ##
## Python extended ##
## ##
## Gael A. Millot ##
## Bioinformatics and Biostatistics Hub ##
## Computational Biology Department ##
## Institut Pasteur Paris ##
## ##
#########################################################################
# to see the log of the building:
# sudo docker run -ti --entrypoint bash <IMAGE_NAME>
# cat building.log
# to export the log file of the image building from the container:
# sudo docker images
# sudo docker run -ti --entrypoint bash <IMAGE_NAME>
# exit
# sudo docker container ls -a # to get all the active containers
# sudo docker cp <containerNAMES>:/building.log </host/path/target>
FROM gmillot/python_v3.9.10_extended_v2.0:gitlab_v8.4
LABEL Gael.Millot=gael.millot@pasteur.fr
LABEL gitlab.dockerfiles="https://gitlab.pasteur.fr/gmillot/dockerfiles"
ENV PY_LIB="\
cyvcf2 \
scipy \
"
# install the packages
RUN echo "\n\n\n\n================\n\npip install\n\n================\n\n\n\n" > /building.log \
&& pip install $PY_LIB | tee -a /building.log \
&& echo "\n\n\n\n================\n\nPIP PACKAGES INSTALLED\n\n================\n\n\n\n" >> /building.log \
&& pip list >> /building.log \
# end install the packages
# inactivated packages because are in the base installation
ENV LC_ALL en_US.UTF-8
ENV LANG en_US.UTF-8
ENV LANGUAGE en_US.UTF-8
ENV LC_NUMERIC en_US.UTF-8
ENTRYPOINT ["/usr/bin/python3"]
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