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Commit 081787ca authored by Bertrand  NÉRON's avatar Bertrand NÉRON
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install seaview from gensoft instead of compile it

parent 7dd0e80c
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...@@ -14,41 +14,7 @@ ...@@ -14,41 +14,7 @@
- gensoft-muscle-3.8.31 - gensoft-muscle-3.8.31
- gensoft-gblocks-0.91b - gensoft-gblocks-0.91b
- name: create link of phyml for seaview - name: install seaview
file:
src: "/local/gensoft2/exe/phyml/3.1/bin/phyml"
dest: "{{ seaview_prefix }}/bin/PhyML-3.1_linux64"
state: link
- name: install seaview dependency
yum: yum:
name: "{{ item }}" name: gensoft-seaview-4.6.2.1
state: latest state: latest
with_items:
- fltk-devel
- name: remove old seaview
file:
path: "{{ seaview_prefix }}/src/seaview/"
state: absent
- name: Create dir source for seaview
file:
path: "{{ seaview_prefix }}/src/seaview"
state: directory
- name: Download seaview
get_url:
url: "ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.2.1.tar.gz"
dest: "{{ seaview_prefix }}/src/seaview"
- name: unarchive seaview
unarchive:
src: "{{ seaview_prefix }}/src/seaview/seaview_4.6.2.1.tar.gz"
dest: "{{ seaview_prefix }}/src/seaview/"
creates: "{{ seaview_prefix }}/src/seaview/seaview_4.6.2.1"
copy: no
- name: Compile seaview
command: make chdir="{{ seaview_prefix }}/src/seaview_4.6.2.1/seaview"
...@@ -63,3 +63,4 @@ ...@@ -63,3 +63,4 @@
- paml - paml
- phyml - phyml
- gblocks - gblocks
- seaview
\ No newline at end of file
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