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hub-courses
python_one_week_4_biologists_solutions
Commits
331d5485
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Commit
331d5485
authored
Jun 08, 2021
by
Bertrand NÉRON
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fix typos
parent
c5581f23
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#58157
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in 12 seconds
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source/Collection_Data_Types.rst
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331d5485
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@@ -360,11 +360,11 @@ In the first algorithm.
| In the second algorithm we read the sequence only once
=======
In the first al
o
grithm.
In the first alg
o
rithm.
| we first compute all kmers we generate 4\ :sup:`kmer length`
| then we count the occurence of each kmer in the sequence
| so for each kmer we read all the sequence so the algorith is in O( 4\ :sup:`kmer length` * ``sequence length``)
| then we count the occur
r
ence of each kmer in the sequence
| so for each kmer we read all the sequence so the algorith
m
is in O( 4\ :sup:`kmer length` * ``sequence length``)
| In the secon algorithm we read the sequence only once
>>>>>>> e986fb63db27fe063adb907bfb916dbb79c5db9b
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@@ -448,7 +448,7 @@ pseudocode:
"""""""""""
| *function reverse_comp(sequence)*
| *complement <- establish a correpondance and each base and its complement*
| *complement <- establish a corre
s
pondance and each base and its complement*
| *rev_seq <- revert the sequence*
| *rev_comp <- empty*
| *for each nt of rev_seq*
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