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Monday/AnnotationMSigDB.md

+# Hands-On: Exploring PATRIC 
+
+
+
+## Organism: Mycobacterium tuberculosis (strain erdmann)
+
+<!-- <img src="images/ATAC-seq_PE.png" width="700" align="center" > -->
+
+## Perfom search 
+
+Go to https://www.patricbrc.org/
+
+* Search for the genome
+        choose 653626.4
+* Check the overview tab, look for:
+```
+Num. of prots
+Num. of annotated prots with an associated  Gene Ontology 
+Num. of enzymes
+```
+                
+* Check the features tab
+and add the GO terms
+* Check all the entries and
+download file (.xls)
+* Put the file in the data directory