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Commit 66d6d3e0 authored by Simon Malesys's avatar Simon Malesys
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src/client/components/TheAboutPage.vue
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......@@ -25,7 +25,7 @@
<a
href="https://research.pasteur.fr/en/member/nicolas-maillet/"
target="_blank"
rel="noopener noreferrer">
rel="author noopener noreferrer">
Nicolas Maillet
</a>
</li>
......@@ -34,7 +34,7 @@
<a
href="https://research.pasteur.fr/en/member/simon-malesys/"
target="_blank"
rel="noopener noreferrer">
rel="author noopener noreferrer">
Simon Malesys
</a>
</li>
......@@ -52,7 +52,7 @@
<a
href="https://research.pasteur.fr/en/member/rachel-torchet/"
target="_blank"
rel="noopener noreferrer">
rel="author noopener noreferrer">
Rachel Torchet
</a>
</li>
......
src/client/components/TheAntibodyPage.vue
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......@@ -25,6 +25,7 @@
class="doc-link"
href="https://gitlab.pasteur.fr/hub/absd#antibodies-identifiers"
target="_blank"
rel="help"
>
?
</a>
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src/client/components/TheHomePage.vue
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......@@ -7,23 +7,19 @@
<a
href="https://www.rcsb.org/"
target="_blank"
rel="noopener noreferrer"
>PDB</a>,
rel="noopener noreferrer">PDB</a>,
<a
href="https://www.ncbi.nlm.nih.gov/genbank/"
target="_blank"
rel="noopener noreferrer"
>GeneBank</a>,
rel="noopener noreferrer">GeneBank</a>,
<a
href="https://www.imgt.org/"
target="_blank"
rel="noopener noreferrer"
>IMGT</a>,
rel="noopener noreferrer">IMGT</a>,
<a
href="https://www.uniprot.org/"
target="_blank"
rel="noopener noreferrer"
>UniProt</a>, INN, among others.
rel="noopener noreferrer">UniProt</a>, INN, among others.
<br>
Despite the vast number of possible antibody sequences, only a few thousand human sequences are publicly accessible as of today. However, these sequences are scattered across multiple different resources, making it challenging to consolidate them into a unified, clean dataset due to issues such as redundancies, missing &quot;pairing&quot; information between heavy and light chains, inconsistencies in metadata, and other errors.
<br>
......@@ -34,14 +30,12 @@
It is essential to note that the data presented here has been compiled from public databases and may be subject to varying open-source licenses. The code for the ABSD project is governed by the <a
href="https://www.gnu.org/licenses/gpl-3.0.en.html#license-text"
target="_blank"
rel="noopener noreferrer"
>GNU GPLv3</a>
rel="noopener noreferrer">GNU GPLv3</a>
license. Developers interested in adding new sources of antibodies can do so relatively simply; please refer to
<a
href="https://gitlab.pasteur.fr/hub/absd/-/tree/master/parsers?ref_type=heads"
target="_blank"
rel="noopener noreferrer"
>
rel="noopener noreferrer">
our Gitlab
</a> for details on how to contribute.
<br>
......@@ -49,76 +43,72 @@
<a
href="http://www.abybank.org"
target="_blank"
rel="noopener noreferrer"
>abYbank</a>,
rel="noopener noreferrer">abYbank</a>,
<a
href="https://www.ncbi.nlm.nih.gov/genbank/"
target="_blank"
rel="noopener noreferrer"
>GeneBank</a> (ids from
rel="noopener noreferrer">GeneBank</a> (ids from
<a
href="https://doi.org/10.1126/science.aad5788"
target="_blank"
rel="noopener noreferrer"
>https://doi.org/10.1126/science.aad5788</a>, Table S7 of Supplementary Materials),
rel="noopener noreferrer">https://doi.org/10.1126/science.aad5788</a>, Table S7 of Supplementary Materials),
<a
href="https://www.imgt.org/"
target="_blank"
rel="noopener noreferrer"
>IMGT</a>,
rel="noopener noreferrer">IMGT</a>,
<a
href="https://www.naturalantibody.com/paired-ngs/"
target="_blank"
rel="noopener noreferrer"
>PairedNGS</a>,
rel="noopener noreferrer">PairedNGS</a>,
<a
href="https://www.rcsb.org/"
target="_blank"
rel="noopener noreferrer"
>PDB</a>,
rel="noopener noreferrer">PDB</a>,
<a
href="https://www.hiv.lanl.gov/components/sequence/HIV/neutralization/download_db.comp"
target="_blank"
rel="noopener noreferrer"
>CATNAP-HIV</a>,
rel="noopener noreferrer">CATNAP-HIV</a>,
<a
href="https://www.uniprot.org/"
target="_blank"
rel="noopener noreferrer"
>UniProt</a>,
rel="noopener noreferrer">UniProt</a>,
<a
href="https://opig.stats.ox.ac.uk/webapps/covabdab/"
target="_blank"
rel="noopener noreferrer"
>CoV-AbDab</a>,
rel="noopener noreferrer">CoV-AbDab</a>,
<a
href="https://opig.stats.ox.ac.uk/webapps/oas/oas_paired/"
target="_blank"
rel="noopener noreferrer"
>OAS</a>,
rel="noopener noreferrer">OAS</a>,
<a
href="https://opig.stats.ox.ac.uk/webapps/plabdab/"
target="_blank"
rel="noopener noreferrer"
>PLAbDab</a>,
rel="noopener noreferrer">PLAbDab</a>,
<a
href="https://opig.stats.ox.ac.uk/webapps/sabdab-sabpred/sabdab"
target="_blank"
rel="noopener noreferrer"
>SAbDab</a> and
rel="noopener noreferrer">SAbDab</a> and
<a
href="https://opig.stats.ox.ac.uk/webapps/sabdab-sabpred/therasabdab/search/"
target="_blank"
rel="noopener noreferrer"
>Thera-SAbDab</a>.
rel="noopener noreferrer">Thera-SAbDab</a>.
</p>
</section>
<div class="version-date">
Last update:
<time :datetime="versionDate">
{{ versionDate }}
</time>
<div class="meta-infos">
<div class="article-doi">
Article:
<a href="https://doi.org/10.1093/nargab/lqae171" target="_blank">
10.1093/nargab/lqae171
</a>
</div>
<div class="version-date">
Database last update:
<time :datetime="versionDate">
{{ versionDate }}
</time>
</div>
</div>
<SearchBar />
......@@ -168,8 +158,11 @@ p {
text-align: justify;
}
.version-date {
margin: auto;
.meta-infos {
display: flex;
flex-flow: row wrap;
justify-content: center;
gap: var(--spacing);
}
.version-date time {
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