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Commit 452db61f authored by Rachel LEGENDRE's avatar Rachel LEGENDRE
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Update runme.sh

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...@@ -16,7 +16,7 @@ conda install -c bioconda pysam ...@@ -16,7 +16,7 @@ conda install -c bioconda pysam
#run the workflow: #run the workflow:
conda activate snakemake conda activate snakemake
module load fastqc module load graalvm/ce-java8-20.0.0 fastqc
module load samtools/1.10 module load samtools/1.10
module load bedtools/2.29.2 module load bedtools/2.29.2
module load cutadapt-devel/2.10 cutadapt/2.10 module load cutadapt-devel/2.10 cutadapt/2.10
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