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4bbdebbf

Commit 4bbdebbf authored 3 years ago by Rachel LEGENDRE

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add Kallisto and sortmeRNA

parent e4e4c1bc

Branches master

Tags v1.2.1

No related merge requests found

Changes 7

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Snakefile 53 additions, 37 deletions

Snakefile
config/cluster_config.json 4 additions, 0 deletions

config/cluster_config.json
config/config.yaml 24 additions, 3 deletions

config/config.yaml
workflow/rules/cutadapt.rules 1 addition, 1 deletion

workflow/rules/cutadapt.rules
workflow/rules/kallisto_index.rules 1 addition, 1 deletion

workflow/rules/kallisto_index.rules
workflow/rules/kallisto_quant.rules 9 additions, 5 deletions

workflow/rules/kallisto_quant.rules
workflow/rules/sortmerna.rules 63 additions, 0 deletions

workflow/rules/sortmerna.rules

with 155 additions and 47 deletions

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