RNAflow is a snakemake pipeline dedicated to standard transcriptomic analysis.
Be careful, RNAflow was principally conceived to run on the HPC of Institut Pasteur, and not on other HPC.
## How to install RNAflow ?
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@@ -33,6 +34,7 @@ In addition to above tools, you need to install pipeline-related tools:
- deeptools
- multiqc
For Institut Pasteur HPC users, these tools are not required, they will be automatically loaded via module during pipeline running via the snakemake `--use-envmodules` instruction.
