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Updated doc and links to the plugins
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@@ -10,8 +10,28 @@ This study aims to understand the dynamics of muscle stem cells during regenerat
- The movie files generated from the _ex vivo_ system produce .czi files, which are then converted to 8-bit TIFF format using a macro (see convertCZIto8bTiff.ijm). Muscle stem cells are tracked using the TrackMate plugin in ImageJ software. The movement of the muscle fibre is then corrected (CellonFiber repository), allowing the tracking of cells to be adjusted relative to a fixed reference frame.
- The movie files generated from the _ex vivo_ system produce .czi files, which are then converted to 8-bit TIFF format using a macro (see [convertCZIto8bTiff.ijm](https://github.com/gletort/ImageJFiles/tree/master/convertFiles)). Muscle stem cells are tracked using the TrackMate plugin in ImageJ software. The movement of the muscle fibre is then corrected (CellonFiber repository), allowing the tracking of cells to be adjusted relative to a fixed reference frame.
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