Update packages_to_install.csv and install_r_packages.R

scripts/install_r_packages.R

@@ -5,10 +5,10 @@
 ### Aim : Install all packages from CRAN, BioConductor or github, requiered in the Shiny app.
 
 ### Install pak packages first
-install.packages(c("pak","pkgcache","pkgdepends"), dependencies= NA)
+install.packages(c("pak","pkgcache","pkgdepends","pillar"), dependencies= NA)
 #### Load file with the list of packages
-packages_list <- read.csv(file = "/opt/scripts/packages_to_install.csv", header = FALSE, sep = ";", stringsAsFactors = FALSE)
+packages_list <- read.csv(file = "/opt/scripts/packages_to_install.csv", header = TRUE, sep = ";", stringsAsFactors = FALSE)
 ### Install packages with dependencies with pak packages
-pak::pkg_install(pkg=packages_list[,1])
+pak::pkg_install(pkg=packages_list$Package_name)
 # clean the cache of pak
 pak::cache_clean()

scripts/packages_to_install.csv

-shiny
+Package_name;Comments
+shiny;cran package
\ No newline at end of file