Updated notebooks

notebooks/01-Python_essentials.ipynb

notebooks/e01-Python_basics.ipynb

notebooks/e01-Python_basics_solution.ipynb

notebooks/e02-Image_handling_basics.ipynb

notebooks/e02-Image_handling_basics_solution.ipynb

notebooks/e02-Numpy_basics.ipynb

notebooks/e04-Thresholding.ipynb

notebooks/e04-Thresholding_solution.ipynb

notebooks/e05-Filtering.ipynb

notebooks/e05-Filtering_solution.ipynb

notebooks/e06-Regions.ipynb

notebooks/e06-Regions_solution.ipynb

notebooks/e09-Cellpose_pipeline.ipynb

notebooks/environment.yml

notebooks/illustrations/cell_atlas_overview.png

notebooks/illustrations/convol_mean copy.html

notebooks/illustrations/convolution.png

notebooks/illustrations/distance_maps.png

notebooks/illustrations/distance_transform.png

notebooks/illustrations/dog_illustration.png