Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
iPPIDB
ippidb-web
Commits
6c263443
Commit
6c263443
authored
Mar 16, 2017
by
Hervé MENAGER
Browse files
add draft model code to retrieve uniprot info from Protein
parent
2ded0768
Changes
1
Hide whitespace changes
Inline
Side-by-side
ippisite/ippidb/models.py
View file @
6c263443
...
...
@@ -3,7 +3,7 @@ from __future__ import unicode_literals
from
django.db
import
models
from
django.forms
import
ModelForm
from
.ws
import
get_pubmed_info
,
get_epo_info
from
.ws
import
get_pubmed_info
,
get_epo_info
,
get_uniprot_info
class
Bibliography
(
models
.
Model
):
"""
...
...
@@ -68,6 +68,12 @@ class Protein(models.Model):
organism
=
models
.
ForeignKey
(
'Taxonomy'
)
molecular_functions
=
models
.
ManyToManyField
(
MolecularFunction
)
def
save
(
self
,
*
args
,
**
kwargs
):
info
=
get_epo_info
(
self
.
id_source
)
self
.
recommended_name_long
=
info
[
'recommended_name'
]
self
.
organism
=
info
[
'organism'
]
super
(
Protein
,
self
).
save
(
*
args
,
**
kwargs
)
class
Domain
(
models
.
Model
):
pfam_acc
=
models
.
CharField
(
'Pfam Accession'
,
max_length
=
10
,
unique
=
True
)
pfam_id
=
models
.
CharField
(
'Pfam Family Identifier'
,
max_length
=
20
)
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment