protein short name is first part of entry name (split on '_')

as ruled by O. Sperandio...


Former-commit-id: ab8b4864ee61689d00b3d86513aca8d3ffdccd2f

ippisite/ippidb/ws.py

@@ -49,6 +49,9 @@ def get_uniprot_info(uniprot_id):
     uniprot_client = UniProt()
     ns = {'u': 'http://uniprot.org/uniprot'}
     resp = uniprot_client.retrieve(uniprot_id)
+    f = open('/tmp/'+uniprot_id+'.xml','w')
+    f.write(str(resp))
+    f.close()
     recommended_name = resp.root.findall(
         'u:entry/u:protein/u:recommendedName/u:fullName', ns)[0].text
     organism = resp.root.findall(
@@ -67,6 +70,7 @@ def get_uniprot_info(uniprot_id):
             'organism': int(organism),
             'gene': gene,
             'entry_name': entry_name,
+            'short_name': entry_name.split('_')[0],
             'molecular_functions': molecular_functions
             }