save objects in Wizard steps to escape storage hell.

Former-commit-id: 7f39a04b19e82c358a9cf5d3bb7a1f3aeacf22b3

ippisite/db.sqlite3.REMOVED.git-id

-ea2455328a1ef5effe52858804d0c303950ec7cf
\ No newline at end of file
+cbc5368d062b8764f1b0d652691f17cd132d699f
\ No newline at end of file

ippisite/ippidb/views.py

@@ -2,11 +2,10 @@ import ippidb
 
 from django.shortcuts import render
 from django.http import HttpResponseRedirect
-from django.forms.models import model_to_dict
 from formtools.wizard.views import SessionWizardView,NamedUrlSessionWizardView
 
 from .forms import IdForm, BibliographyForm, PDBForm, ProteinForm, ProteinDomainComplexTypeForm, ProteinDomainComplexForm, PpiForm, ProteinFormSet
-from .models import Protein, Bibliography, Taxonomy
+from .models import Protein, Bibliography
 from .ws import get_pdb_uniprot_mapping
 
 def index(request):
@@ -40,25 +39,17 @@ TEMPLATES = {"IdForm": "IdForm.html",
              "ProteinDomainComplexForm": "ProteinDomainComplexForm.html",
              "PpiForm": "PpiForm.html"}
 
-class Ol(list):
-    ordered = True
-
 class IppiWizard(NamedUrlSessionWizardView):
     def get_template_names(self):
         return [TEMPLATES[self.steps.current]]
 
     def get_form_instance(self, step):
         if self.steps.current=='BibliographyForm':
-            data = self.storage.get_step_data('IdForm')
-            obj = Bibliography(**data)
-            return obj
+            pk = self.storage.get_step_data('IdForm').get('pk')
+            return Bibliography.objects.get(pk=pk)
         if self.steps.current=='ProteinForm':
-            data = self.storage.get_step_data('PDBForm').getlist('set')
-            proteins = []
-            for data_item in data:
-                data_item['organism'] = Taxonomy.objects.get(pk=data_item['organism'])
-                proteins.append(Protein(**data_item))
-            return Ol(proteins)
+            pks = self.storage.get_step_data('PDBForm').get('pks')
+            return Protein.objects.filter(id__in=pks)
 
     def process_step(self, form):
         """
@@ -66,22 +57,25 @@ class IppiWizard(NamedUrlSessionWizardView):
         The added code just sets the form model for use in later forms
         when appropriate
         """
+        data = super(IppiWizard, self).process_step(form).copy()
         if self.steps.current=='IdForm':
             form.instance.autofill()
-            return model_to_dict(form.instance)
+        if self.steps.current in ['IdForm', 'Bibliography']:
+            form.instance.save()
+            data['pk'] = form.instance.id
         if self.steps.current=='PDBForm':
             uniprot_ids = get_pdb_uniprot_mapping(form.cleaned_data['pdb_id'])
-            proteins = []
+            protein_ids = []
             for uniprot_id in uniprot_ids:
                 try:
                     p = Protein.objects.get(uniprot_id=uniprot_id)
                 except Protein.DoesNotExist:
                     p = Protein()
                     p.uniprot_id = uniprot_ids[0]
-                    p.autofill()
-                proteins.append(p)
-            return {'set': [model_to_dict(p, exclude=['molecular_functions']) for p in proteins]}
-        return self.get_form_step_data(form)
+                    p.save()
+                protein_ids.append(p.id)
+            data['pks'] = protein_ids
+        return data
 
     def done(self, form_list, **kwargs):
         return render(self.request, '/admin-session/add.html', {