Commits · 2b3395491349b2ed5a0eb132a83b28e70dc13df8 · iPPIDB / ippidb-web

Aug 21, 2018
- add Marvin JS license during deployment · 2b339549
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 909569656b7f8d9e310833988c0251f7252cef1e
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  2b339549
- ignore MarvinJS license file in GIT · bf51b0ef
  Hervé MENAGER authored 6 years ago
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Former-commit-id: c867c7d0dabe3b375e1609c34f5a6f0e531777af
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  bf51b0ef
- add marvinjs library · 577f9114
  Hervé MENAGER authored 6 years ago
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(without the license)


Former-commit-id: 3578407b58a1b275f31b6190f565088a49f51b04
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  577f9114
Aug 20, 2018

install openbabel development headers · a84eaba9
Hervé MENAGER authored 6 years ago
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Former-commit-id: ff769f7f076f8c0c53e86a490a4bc36127ed0d8a
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a84eaba9
install swig for openbabel bindings · 7920ec81
Hervé MENAGER authored 6 years ago
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Former-commit-id: 008c14734aa7ce58ab2790928be4c5ba27f98dbd
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7920ec81
also install openbabel for tests · 1c9bcb6c
Hervé MENAGER authored 6 years ago
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Former-commit-id: 2fe506ced0717a6c7a366bd2f790a68e209163df
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1c9bcb6c
install openbabel and python bindings · 620d87e3
Hervé MENAGER authored 6 years ago
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Former-commit-id: f4a9ce0206343f8a31b309cee279792695f39212
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620d87e3

Chemical similarity part 1 (WIP) · 0c159fe3

Hervé MENAGER authored 6 years ago

Add code to embed MarvinJS editor and convert mol to smiles
TODO: add ansible code to install MarvinJS code and license
TODO: add ansible code to install openbabel and pybel

Former-commit-id: 04e76c75250ddff1fa45ddf4f4f9277995ae75a4

0c159fe3

refactor smilesDrawer component · a9a774ef

Hervé MENAGER authored 6 years ago

- id and smiles are not necessarily coming from a Compound obj.
- add a "theme" option
- increase line thickness a bit


Former-commit-id: 3b59733be379a7c3e8560643e0a3c2107738eb3c

a9a774ef

Aug 14, 2018

Update onloadTest JS function to set the appropriate value for the Number of... · c8ff3e37

Rachel TORCHET authored 6 years ago

Update onloadTest JS function to set the appropriate value for the Number of copies of the protein in the complex according to the architecture


Former-commit-id: d5001cd4f940bde532582bc6ea2105d0487925fe

c8ff3e37

Add JS function to duplicate form in formset according specific conditions · ab7790fe
Rachel TORCHET authored 6 years ago
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Former-commit-id: 504a958214d48a9a6efc03cb5dbb934d0b85e3ee
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ab7790fe

Aug 07, 2018
- Add compound in CompoundForm is now available! Next step add delete button · 362653fc
  Rachel TORCHET authored 6 years ago
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Former-commit-id: d7fd9a00957dd1470f4068fe126b1c7b9250f136
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  362653fc
Aug 03, 2018
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/iPPIDB · 9c94408a
  Rachel TORCHET authored 6 years ago
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Former-commit-id: d6624ac1ab2382963c075510177cd2f522053862
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  9c94408a
- Can add new form into Compound step, but label ids don't update yet... · ce95bb63
  Rachel TORCHET authored 6 years ago
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Former-commit-id: 6efa2e96589740a6617e31e14b369f82625cd39f
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  ce95bb63
Aug 02, 2018
- tweak iPPI-DB projects compounds table · a48e9f02
  Hervé MENAGER authored 6 years ago
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* th -> td
* set a fixed width for the compound structure


Former-commit-id: e2b70e215ab4a361001bed55d0e13f4e022fc18b
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  a48e9f02
- reorder and tweak display for table columns in compounds list · bdebeb0d
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 6eca475e734cc0cfcbb11d08094460412f304bc1
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  bdebeb0d
- add compound structure in columns of compound list table · 9f384955
  Hervé MENAGER authored 6 years ago
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Former-commit-id: a3e88d56f88150b9b363ad9762b235d6a71a9313
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  9f384955
- compound 2D structure dimensions can be changed · 52da6102
  Hervé MENAGER authored 6 years ago
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Former-commit-id: f87ee35f2f755bea1f82d68d9bf9c145c8a51a33
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  52da6102
- Adjust column headers in compounds list table · 7d8d29e8
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 0752ee85e7a4da8e1c8b9e03aad3fe4b0050577e
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  7d8d29e8
- Correct table headers and style in compounds list · 7738fc0d
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 2df7b91d043a36f987f1cf4670cc7989be3de635
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  7738fc0d
- add strips to table for compounds list · a79a6adc
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 967ea765ca9ce2cc05193028bb0f15fe48a36b55
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  a79a6adc
- add more information for thumbnails on mouse over for compounds list · dc964bf4
  Hervé MENAGER authored 6 years ago
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Former-commit-id: e15f2b74c2474ba2f7e43583324987d8c379a386
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  dc964bf4
- remove margin from the iPPI-DB common name in the thumbnail · d64856a8
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 5d997bfcc69375f281f6e81edd8ff0a39d0930d8
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  d64856a8
Aug 01, 2018
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/iPPIDB · 576c59d0
  Rachel TORCHET authored 6 years ago
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Former-commit-id: 50305d3adcc44cac5295d6427d13fc53def89bdf
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  576c59d0
- Restore CompoundForm aspect · c89e4745
  Rachel TORCHET authored 6 years ago
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Former-commit-id: 32bb7504bcc9223f7f1a590a8149a3e815cc9cf8
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  c89e4745
- fix "number of pubs" filter in compounds list · ff7a81ca
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 596f02822be6b1033db352043a630570357bc50c
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  ff7a81ca
- correct redirections between compound url for BDCHEM and iPPI-DB · 78e32e6f
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 5dc45f42c5c744d55bbedbf98b69b820df3958f0
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  78e32e6f
- import RedirectView in urls · 094a47e1
  Hervé MENAGER authored 6 years ago
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Former-commit-id: b265c90d598579983e8e1a386983fb232263e9d5
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  094a47e1
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/iPPIDB · 55235cd3
  Hervé MENAGER authored 6 years ago
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Former-commit-id: a87f28ebc18af9c67eb106dcb92766ac4c4c68bc
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  55235cd3
Jul 31, 2018
- use smilesDrawer to draw compounds · a412d619
  Hervé MENAGER authored 6 years ago
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Former-commit-id: bc1aea02c5aa48d2967c78ded8b19867d51c4db4
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  a412d619
- delete name=compound_card on previous update · d5bb5e38
  Rachel TORCHET authored 6 years ago
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Former-commit-id: d730a6c7300603a89809a1e9ccff8fe30d495448
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  d5bb5e38
- update urls file to fit with Bryan needs · d7e5760f
  Rachel TORCHET authored 6 years ago
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Former-commit-id: b48115c09c74afa147caf07e6281ab528ec6c3f9
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  d7e5760f
- restructure the compounds list view · 6f5a4bb9
  Hervé MENAGER authored 6 years ago
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* this view is now class based and a lot more structured
* filters are handled supposedly in a clever manner


Former-commit-id: 510e9b5282b06d28fb839ba20ff44d76ab41f584
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  6f5a4bb9
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/iPPIDB · c1f83d0d
  Rachel TORCHET authored 6 years ago
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Former-commit-id: 16df7d039c0ac7f7d72228745c412776f4c8d515
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  c1f83d0d
- Update navigation and ProteinDomainComplexForm to take parameters from previous step into account · 5825febb
  Rachel TORCHET authored 6 years ago
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Former-commit-id: eb05cc7225b71022a8eea0b92aa48423faf62951
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  5825febb
Jul 29, 2018
- denormalize ppi name to improve compound query performance · 85b91008
  Hervé MENAGER authored 6 years ago
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Former-commit-id: efe273eac847d110d0b8791fa2eb89191d212ffa
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  85b91008
Jul 28, 2018
- avoid crash when the compounds list resultset is empty · 77ebf4d0
  Hervé MENAGER authored 6 years ago
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Former-commit-id: bc41c38f663e431a2bfb2b8bb7036b0ed249d410
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  77ebf4d0
Jul 27, 2018
- Ppi fields pdb_id and family can be blank · e8419a04
  Hervé MENAGER authored 6 years ago
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Former-commit-id: a334477697b35ef6e5ca68ecff70604d49a59c9f
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  e8419a04
- CompoundActivityResult inhibition_percentage can be blank · ab60d00a
  Hervé MENAGER authored 6 years ago
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sqlite db modified


Former-commit-id: 5c12ac45f86f8e3865adbd9892e7c757372417ea
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  ab60d00a
- CompoundActivityResult inhibition_percentage can be blank · 164f039b
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 33780e413e6e3cd5b2b8fb919eabb8fb5c85db70
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  164f039b