Merge branch 'operon-struct-type' into operon-struct-type-article

components/content/ArticleSystemDistributionPlot.vue

@@ -20,7 +20,6 @@ const margin = ref<PlotMargin>({
     marginLeft: 40
 
 })
-const { width } = useDisplay();
 const systemHits = ref(undefined)
 const refseqTaxo = ref(undefined)
 const selectedTaxoRank = ref("phylum")
@@ -158,7 +157,7 @@ const distributionOptions = computed(() => {
 
 const systemName = computed(() => {
     const toValPage = toValue(page)
-    return toValPage?.system ?? toValPage?.title ?? undefined
+    return toValPage?.refseqSystemName ?? toValPage?.title ?? undefined
 })
 
 watchEffect(() => {

components/content/SystemOperonStructure.vue

@@ -102,7 +102,7 @@ const sanitizedSubsystem = computed(() => {
     // if (systemModel) {
     //     return subsystem.replace(pageVal.title, systemModel)
     // }
-    // else {
+    // else {   
     //     return subsystem
     // }
     return subsystem

content/3.defense-systems/avs.md

 ---
 title: Avs
-systemModel: AVAST
 layout: article
 tableColumns:
     article:

content/3.defense-systems/cas.md

 ---
 title: CRISPR-Cas
-systemModel: Cas
+refseqSystemName: Cas
 layout: article
 tableColumns:
     article:

packages/df-wiki-cli/scripts/fill-local-meilisearch.sh

@@ -6,8 +6,8 @@ PUBLIC_DIR=../../../public
 
 
 # system operon structure
-df-wiki-cli meilisearch delete-all-documents system-operon-structure
-df-wiki-cli content system-operon-structure --tag "1.2.2" --version "1.2.2" --output ${DATA_DIR}/system-structures.csv
+df-wiki-cli meilisearch delete-all-documents systemoperonstruct
+df-wiki-cli content system-operon-structure --structure  ${DATA_DIR}/all_predictions_statistics.tsv --output ${DATA_DIR}/system-structures.csv
 df-wiki-cli meilisearch update system-operon-structure --file ${DATA_DIR}/system-structures.csv