adding copyright

extract_uniprot_XML.py

@@ -4,10 +4,51 @@
 # usage from a list of accession  ./extract_uniprot_XML.py -x uniprot.xml -l accessions.txt -o output_name
 # created Jan 22; KD
 
+
+#############################################################################
+# Author: Karen Druart -- karen.druart@pasteur.fr                           #
+# https://research.pasteur.fr/fr/member/karen-druart/                       #
+# Copyright (c) 2022 Institut Pasteur                                       #
+#                 				                                            #
+#                                                                           #
+#  Redistribution and use in source and binary forms, with or without       #
+#  modification, are permitted provided that the following conditions       #
+#  are met:                                                                 #
+#                                                                           #
+#  1. Redistributions of source code must retain the above copyright        #
+#  notice, this list of conditions and the following disclaimer.            #
+#  2. Redistributions in binary form must reproduce the above copyright     #
+#  notice, this list of conditions and the following disclaimer in the      #
+#  documentation and/or other materials provided with the distribution.     #
+#  3. Neither the name of the copyright holder nor the names of its         #
+#  contributors may be used to endorse or promote products derived from     #
+#  this software without specific prior written permission.                 #
+#                                                                           #
+#  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS      #
+#  "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT        #
+#  LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR    #
+#  A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT     #
+#  HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,   #
+#  SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT         #
+#  LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,    #
+#  DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY    #
+#  THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT      #
+#  (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE    #
+#  OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.     #
+#                                                                           #
+#  This program is free software: you can redistribute it and/or modify     #
+#                                                                           #
+#############################################################################
+
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+
 import re
 import sys
 import getopt
-import json