Commits · master · Maxime BORRY / coGSEA

May 23, 2017
- Update README.md · bf8f1c30
  Maxime BORRY authored 7 years ago
  
  bf8f1c30
- Update README.md · 53c813fa
  Maxime BORRY authored 7 years ago
  
  53c813fa
- changed wrong package call for na.omit (from base to stats) · 4af7192d
  Maxime BORRY authored 7 years ago
  
  4af7192d
- switched to double colon (package::function) notation to avoid namespace · 06e74b8a
  Maxime BORRY authored 7 years ago
```
conflicts
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  06e74b8a
- changed label in 1 plot · 62ff3ca5
  Maxime BORRY authored 7 years ago
```
added data preparing tutorials
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  62ff3ca5
May 19, 2017
- re · b45de743
  Maxime BORRY authored 7 years ago
  
  b45de743
- remove FactoMineR dependancy · 0408ba39
  Maxime BORRY authored 7 years ago
  
  0408ba39
- fix typo · d431ace4
  Maxime BORRY authored 7 years ago
  
  d431ace4
- removed knitr dependancy · dc09aed1
  Maxime BORRY authored 7 years ago
```
added documentation for preparing data
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  dc09aed1
May 16, 2017
- added exampleData and documentation. · 9a6d7479
  Maxime BORRY authored 7 years ago
```
Modified readme
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  9a6d7479
May 15, 2017
- added avg rank to output csv table · b7f36c73
  Maxime BORRY authored 7 years ago
  
  b7f36c73
- fix typo · 095526a3
  Maxime BORRY authored 7 years ago
  
  095526a3
- adding mean ranks · 66fe0b6d
  Maxime BORRY authored 7 years ago
  
  66fe0b6d
- updated documentation · 6581faba
  Maxime BORRY authored 7 years ago
  
  6581faba
- change number of rows in heatmap · 4a0263c4
  Maxime BORRY authored 7 years ago
  
  4a0263c4
- smaller font size for heatmap rows · 6431b3af
  Maxime BORRY authored 7 years ago
  
  6431b3af
- fixed heatmap plot call · f7b60261
  Maxime BORRY authored 7 years ago
  
  f7b60261
- added heatmap running message · 0066a0bc
  Maxime BORRY authored 7 years ago
  
  0066a0bc
- added heatmap calling · 356cf10c
  Maxime BORRY authored 7 years ago
  
  356cf10c
- save abbreviation table · 72448626
  Maxime BORRY authored 7 years ago
  
  72448626
- fixed some gene set issues mainly · a335fd0c
  Maxime BORRY authored 7 years ago
  
  a335fd0c
May 11, 2017
- modified abbreviations in resumPlot2 · 70101612
  Maxime BORRY authored 7 years ago
  
  70101612
May 09, 2017
- update in doc · 219fe7c9
  Maxime BORRY authored 7 years ago
  
  219fe7c9
- further modifications · 1757553f
  Maxime BORRY authored 7 years ago
  
  1757553f
- removed lazydata · b0869501
  Maxime BORRY authored 7 years ago
  
  b0869501
- remove setrank method · e96fd4eb
  Maxime BORRY authored 7 years ago
  
  e96fd4eb
- moved setrank db from sysdata to lazydata method · f5bef567
  Maxime BORRY authored 7 years ago
  
  f5bef567
- split C2 in reactome and KEGG for setrank · 53de98c6
  Maxime BORRY authored 7 years ago
```
modified ggplot for interactive plot in shiny
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  53de98c6
May 05, 2017
- fixed typo · bd0ce9e7
  Maxime BORRY authored 7 years ago
  
  bd0ce9e7
- 1 to 2 column in abreviation table · 18ed3fba
  Maxime BORRY authored 7 years ago
  
  18ed3fba
- update in rownames mapping · d7c9c871
  Maxime BORRY authored 7 years ago
  
  d7c9c871
- typo · 7d410769
  Maxime BORRY authored 7 years ago
  
  7d410769
- typo · 31d7c1f9
  Maxime BORRY authored 7 years ago
  
  31d7c1f9
- typo · b7c1cc45
  Maxime BORRY authored 7 years ago
  
  b7c1cc45
- - splitting C2 in reactome and KEGG · 18edd3c9
  Maxime BORRY authored 7 years ago
```
- abbreviating gene sets names
```
  18edd3c9
- fixed typo · acd9c487
  Maxime BORRY authored 7 years ago
  
  acd9c487
- modified external dependancies call · 24fb5ca0
  Maxime BORRY authored 7 years ago
  
  24fb5ca0
- update documentation · ca7a83ac
  Maxime BORRY authored 7 years ago
  
  ca7a83ac
- added egsea credits · 5d8a926a
  Maxime BORRY authored 7 years ago
  
  5d8a926a
- changed sysdata.rda · 800b264a
  Maxime BORRY authored 7 years ago
  
  800b264a