fix: did not get all systems

packages/df-wiki-cli/df_wiki_cli/content/main.py

@@ -185,10 +185,10 @@ def systems(
                     with open(file) as f:
                         metadata, _ = frontmatter.parse(f.read())
                         del metadata["layout"]
+                        sanitizedMetadata = {**metadata}
                         if "tableColumns" in metadata:
                             table_data = metadata["tableColumns"]
                             if "PFAM" in table_data:
-                                # print(table_data["PFAM"])
                                 pfams_list = [
                                     pfam.strip()
                                     for pfam in table_data["PFAM"].split(",")
@@ -210,7 +210,7 @@ def systems(
                                             style="red",
                                         )
                                         continue
-                                del metadata["tableColumns"]
+                                sanitizedMetadata["PFAM"] = pfam_metadata
 
                             if "article" in table_data:
                                 metadata["doi"] = table_data["article"]["doi"]
@@ -219,9 +219,8 @@ def systems(
                                         "abstract"
                                     ]
                                 del table_data["article"]
+                            del metadata["tableColumns"]
                             sanitizedMetadata = {**metadata, **table_data}
-
-                                sanitizedMetadata["PFAM"] = pfam_metadata
                             systems.append(sanitizedMetadata)
 
             json_object = json.dumps(systems, indent=2)