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Commit 9c241d08 authored by Remi  PLANEL's avatar Remi PLANEL
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add a command to organize structure files

parent c5c010d0
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1 merge request!134Resolve "Table with all PDB files, to make them available to download"
Pipeline #118263 passed
This commit is part of merge request !134. Comments created here will be created in the context of that merge request.
import typer import typer
import sys import sys
import re
import shutil
from typing_extensions import Annotated from typing_extensions import Annotated
from typing import Optional, List from typing import Optional, List
from pathlib import Path from pathlib import Path
...@@ -72,3 +74,40 @@ def lint( ...@@ -72,3 +74,40 @@ def lint(
sys.exit(1) sys.exit(1)
else: else:
console.print("[green] Everything is alright") console.print("[green] Everything is alright")
@app.command()
def structure(
dir: Annotated[
Path,
typer.Option(
exists=True,
file_okay=False,
dir_okay=True,
writable=False,
readable=True,
resolve_path=True,
),
],
output: Annotated[
Path,
typer.Option(
exists=True,
file_okay=False,
dir_okay=True,
writable=True,
readable=True,
resolve_path=True,
),
],
):
console.rule(f"[bold blue]{dir.name}", style="blue")
for f in dir.iterdir():
console.print(f"[green] {f.name}")
# get the system name
system = re.split("_|\.", f.name)[0].lower()
console.print(system)
systemDir = output / system
systemDir.mkdir(parents=True, exist_ok=True)
shutil.copy2(f, systemDir)
[tool.poetry] [tool.poetry]
name = "df-wiki-cli" name = "df-wiki-cli"
version = "0.1.1" version = "0.1.2"
description = "" description = ""
authors = ["Remi PLANEL <rplanel@pasteur.fr>"] authors = ["Remi PLANEL <rplanel@pasteur.fr>"]
readme = "README.md" readme = "README.md"
......
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