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Nicolas MAILLET
rpg
Commits
e861cb78
Commit
e861cb78
authored
May 02, 2018
by
Nicolas MAILLET
Browse files
Modify help
parent
b913dfbe
Changes
1
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Inline
Side-by-side
rpg/RapidPeptidesGenerator.py
View file @
e861cb78
...
...
@@ -230,18 +230,23 @@ def main():
"-m option). Cleaving can be "
"sequential or concurrent (-d"
" option). Resulting peptides"
" are outputted in a file (-o "
"option) if fasta, csv or tsv"
" format (-f option). Classic"
"al enzymes are included (-l "
"option to print available en"
"zymes) but it is possible to"
" define other enzymes (-a op"
"tion)."
)
" are outputted in a file (-o"
" option) if fasta, csv or ts"
"v format (-f option). Classi"
"cal enzymes are included (-l"
" option to print available e"
"nzymes) but it is possible t"
"o define other enzymes (-a o"
"ption). See https://gitlab.p"
"asteur.fr/nmaillet/rpg/ and "
"https://rapid-peptide-genera"
"tor.readthedocs.io for more "
"informations."
)
group_launch
=
parser
.
add_mutually_exclusive_group
(
required
=
True
)
group_launch
.
add_argument
(
"-a"
,
"--addenzyme"
,
action
=
"store_true"
,
help
=
"Create a new enzyme. See the manual"
" for more information"
)
help
=
"Create a new enzyme. See https://rapid-pe"
\
"ptide-generator.readthedocs.io for more inform"
\
"ations"
)
parser
.
add_argument
(
"-d"
,
"--digest"
,
metavar
=
""
,
choices
=
[
's'
,
'sequential'
,
'c'
,
'concurrent'
],
default
=
"s"
,
help
=
"Digestion mode. Either 's', 'seque"
...
...
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