Merge branch 'dev' into 20230129

README.md

@@ -82,10 +82,10 @@ All the [command arguments supported by `TaggingBackends`](https://gitlab.pasteu
 Using the [`20230129`](https://gitlab.pasteur.fr/nyx/MaggotUBA-adapter/-/tree/20230129) branch, the `20230129` tagger can be called on a supported tracking data file with:
 
 ```
-poetry run tagging-backend predict --model-instance 20230129 --skip-make-dataset
+poetry run tagging-backend predict --model-instance 20230129
 ```
 
-The `--skip-make-dataset` option is optional. It only makes *tagging-backend* slightly faster.
+Note: since `TaggingBackends==0.10`, the `--skip-make-dataset` argument is default behavior. Pass `--make-dataset` instead to enforce the former default.
 
 For the above command to work, the track data file must be placed (*e.g.* copied) in the `data/raw/20230129` directory, to be first created or cleared.
 

pyproject.toml

 [tool.poetry]
 name = "MaggotUBA-adapter"
-version = "0.9.1"
+version = "0.10"
 description = "Interface between MaggotUBA and the Nyx tagging UI"
 authors = ["François Laurent"]
 license = "MIT"

src/maggotuba/models/trainers.py

@@ -71,7 +71,7 @@ class MaggotTrainer:
 
     def pad(self, target_t, defined_t, data):
         if data.shape[0] == 1:
-            return data
+            return np.repeat(data, len(target_t), axis=0)
         else:
             head = searchsortedfirst(target_t, defined_t[0])
             tail = len(target_t) - (searchsortedlast(target_t, defined_t[-1]) + 1)