In the `LarvaTagger` directory created above, launch the Julia interpreter:
In the `LarvaTagger` directory created above, launch the Julia interpreter:
```
```
julia --project
julia --project=.
```
```
In the interpreter, to launch the editor, type:
In the interpreter, to launch the editor, type:
```
```
...
@@ -64,7 +64,7 @@ The script will also launch a Julia interpreter, and give extra guidance on *e.g
...
@@ -64,7 +64,7 @@ The script will also launch a Julia interpreter, and give extra guidance on *e.g
## Automatic tagging
## Automatic tagging
To extend the editor with `MaggotUBA` automatic tagging, checkout out the [recommanded installation steps for TaggingBackends and MaggotUBA](https://gitlab.pasteur.fr/nyx/TaggingBackends#recommanded-installation-and-troubleshooting).
To extend the editor with `MaggotUBA` automatic tagging, checkout out the [recommended installation steps for TaggingBackends and MaggotUBA](https://gitlab.pasteur.fr/nyx/TaggingBackends#recommended-installation).
If the backend directory is created right in the `LarvaTagger` directory, `LarvaTagger.jl` will automatically find it.
If the backend directory is created right in the `LarvaTagger` directory, `LarvaTagger.jl` will automatically find it.
...
@@ -78,11 +78,11 @@ Similarly, to let *larvatagger.jl* know about MaggotUBA:
...
@@ -78,11 +78,11 @@ Similarly, to let *larvatagger.jl* know about MaggotUBA:
scripts/larvatagger.jl open <path/to/data/file> --backends=<path/to/MaggotUBA's/parent/directory> --browser
scripts/larvatagger.jl open <path/to/data/file> --backends=<path/to/MaggotUBA's/parent/directory> --browser
```
```
The larvatagger.jl script can be used to proceed with training a new tagger:
The larvatagger.jl script can also be used to train a new tagger: