Set of commits to be tagged v0.17

Changelog

• Support for spine-only tracking data, including MaggotUBA's larva_dataset hdf5 files.
• confusion switch for the larvatagger.sh script.
• In the Tracks panel of the GUI, larva ids can be hovered and clicked to search and select individual larvae.
• 2D view size is doubled on macOS platforms.
• --view-factor option for the open switch.
• --debug option for the train and predict switches.
• --embeddings option for the predict switch.

Associated releases:

• PlanarLarvae v0.15
• TaggingBackends v0.17
• MaggotUBA-adapter v0.18

recipes/Dockerfile

@@ -79,7 +79,7 @@ RUN if [ -z $TAGGINGBACKENDS_BRANCH ]; then \
  && rm -rf .git \
  && poetry install --only main \
  && poetry add "pynvml==11.4.1" \
- && if [ "$(echo $BACKEND | cut -d/ -f2)" = "main" ] || [ "$(echo $BACKEND | cut -d/ -f2)" = "dev" ] || [ "$(echo $BACKEND | cut -d/ -f2)" = "debug" ]; then \
+ && if [ "$(echo $BACKEND | cut -d/ -f2)" = "main" ] || [ "$(echo $BACKEND | cut -d/ -f2)" = "dev" ]; then \
     julia -e 'using Pkg; Pkg.add("JSON3")' \
  && scripts/make_models.jl default; \
     fi \
@@ -88,3 +88,15 @@ RUN if [ -z $TAGGINGBACKENDS_BRANCH ]; then \
 
 COPY recipes/checkgpu /bin/
 
+
+FROM backend AS confusion
+
+ARG PYTHON_ENV=/app/MaggotUBA
+
+RUN test -d $PYTHON_ENV \
+ && cd $PYTHON_ENV \
+ && poetry add "scikit-learn==1.3.0" \
+ && rm -rf ~/.cache
+
+ADD https://gitlab.pasteur.fr/nyx/TaggingBackends/-/raw/dev/scripts/confusion.py?ref_type=heads&inline=false /bin/confusion.py
+