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  • Riccardo PELLARIN
  • recursive-gmconvert
  • Issues
  • #2
Closed
Open
Issue created Mar 09, 2018 by Riccardo PELLARIN@rpellariOwner

Writing submaps optional?

this line

echo ${profile_cmd} ${gmconvert} -imap ${map_name}  -gmml 'tmp_$((SLURM_ARRAY_TASK_ID+offset)).txt' -oimap $n/'sub_$((SLURM_ARRAY_TASK_ID+offset-1)).mrc' -ogmm $n/${n}_'$((SLURM_ARRAY_TASK_ID-1+offset))'.gmm -ng ${n_gaussians} -zth ${threshold}

should be

	echo ${profile_cmd} ${gmconvert} -imap ${map_name}  -gmml 'tmp_$((SLURM_ARRAY_TASK_ID+offset)).txt'  -ogmm $n/${n}_'$((SLURM_ARRAY_TASK_ID-1+offset))'.gmm -ng ${n_gaussians} -zth ${threshold}

unless submaps are needed for something else...

that will save a lot of disk space (and time)

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