refined manhattan plots

jass/models/plots.py

@@ -77,7 +77,7 @@ def create_global_plot(work_file_path: str, global_plot_path: str):
         max_reg = np.max(df["-log10(Joint p-value)"])
         if maxy < max_reg:
             maxy =  max_reg
-        plt.scatter(df['plot_position'],df["-log10(Joint p-value)"] ,s=10,color=[colors[i%2] for i in df.CHR.astype(int)])
+        plt.scatter(df['plot_position'],df["-log10(Joint p-value)"] ,s=3,color=[colors[i%2] for i in df.CHR.astype(int)])
 
 
     ax.set_xticks(lab_pos)