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Commit 92f43432 authored by fltesson's avatar fltesson
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Put relevant abstract in frontmatter

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content/3.defense-systems/abic.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF16872 PFAM: PF16872
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiC # AbiC
...@@ -54,14 +56,3 @@ A system from *Klebsiella pneumoniae's PICI (KpCIFDAARGOS_1313)* in *Klebsiella ...@@ -54,14 +56,3 @@ A system from *Klebsiella pneumoniae's PICI (KpCIFDAARGOS_1313)* in *Klebsiella
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, P335 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, P335 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abid.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF07751 PFAM: PF07751
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiD # AbiD
...@@ -48,14 +50,3 @@ AbiD systems were experimentally validated using: ...@@ -48,14 +50,3 @@ AbiD systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abie.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF08843, PF09407, PF09952, PF11459, PF13338, PF17194 PFAM: PF08843, PF09407, PF09952, PF11459, PF13338, PF17194
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiE # AbiE
...@@ -67,15 +69,3 @@ AbiE systems were experimentally validated using: ...@@ -67,15 +69,3 @@ AbiE systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
- doi: 10.1093/nar/gkt1419
---
::
content/3.defense-systems/abig.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF10899, PF16873 PFAM: PF10899, PF16873
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiG # AbiG
...@@ -55,14 +57,3 @@ AbiG systems were experimentally validated using: ...@@ -55,14 +57,3 @@ AbiG systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abih.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF14253 PFAM: PF14253
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiH # AbiH
...@@ -50,15 +52,3 @@ AbiH systems were experimentally validated using: ...@@ -50,15 +52,3 @@ AbiH systems were experimentally validated using:
A system from *lactococci* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005) A system from *lactococci* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
- doi: 10.1111/j.1574-6968.1996.tb08446.x
---
::
content/3.defense-systems/abii.md
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...@@ -9,6 +9,8 @@ tableColumns: ...@@ -9,6 +9,8 @@ tableColumns:
Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiI # AbiI
...@@ -49,13 +51,3 @@ AbiI systems were experimentally validated using: ...@@ -49,13 +51,3 @@ AbiI systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abij.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF14355 PFAM: PF14355
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiJ # AbiJ
...@@ -50,14 +52,3 @@ AbiJ systems were experimentally validated using: ...@@ -50,14 +52,3 @@ AbiJ systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abik.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00078 PFAM: PF00078
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiK # AbiK
...@@ -50,15 +52,3 @@ AbiK systems were experimentally validated using: ...@@ -50,15 +52,3 @@ AbiK systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
- doi: 10.1093/nar/gkac467
---
::
content/3.defense-systems/abil.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF13175, PF13304, PF13707 PFAM: PF13175, PF13304, PF13707
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiL # AbiL
...@@ -57,14 +59,3 @@ AbiL systems were experimentally validated using: ...@@ -57,14 +59,3 @@ AbiL systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abin.md
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...@@ -9,6 +9,8 @@ tableColumns: ...@@ -9,6 +9,8 @@ tableColumns:
Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiN # AbiN
...@@ -49,13 +51,3 @@ AbiN systems were experimentally validated using: ...@@ -49,13 +51,3 @@ AbiN systems were experimentally validated using:
A system from *lactococcal prophage* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005) A system from *lactococcal prophage* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abio.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF01443, PF09848 PFAM: PF01443, PF09848
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiO # AbiO
...@@ -50,14 +52,3 @@ AbiO systems were experimentally validated using: ...@@ -50,14 +52,3 @@ AbiO systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abip2.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00078 PFAM: PF00078
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiP2 # AbiP2
...@@ -52,15 +54,3 @@ Subsystem RT-Abi-P2 with a system from *Escherichia coli* in *Escherichia coli* ...@@ -52,15 +54,3 @@ Subsystem RT-Abi-P2 with a system from *Escherichia coli* in *Escherichia coli*
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
- doi: 10.1093/nar/gkac467
---
::
content/3.defense-systems/abiq.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF13958 PFAM: PF13958
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiQ # AbiQ
...@@ -50,15 +52,3 @@ AbiQ systems were experimentally validated using: ...@@ -50,15 +52,3 @@ AbiQ systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
- doi: 10.1128/AEM.64.12.4748-4756.1998
---
::
content/3.defense-systems/abir.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00176, PF00271, PF04545, PF04851, PF13091 PFAM: PF00176, PF00271, PF04545, PF04851, PF13091
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiR # AbiR
...@@ -64,14 +66,3 @@ AbiR systems were experimentally validated using: ...@@ -64,14 +66,3 @@ AbiR systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against c2 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against c2 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abit.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF18864 PFAM: PF18864
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiT # AbiT
...@@ -57,14 +59,3 @@ AbiT systems were experimentally validated using: ...@@ -57,14 +59,3 @@ AbiT systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, P335 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, P335 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abiu.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF10592 PFAM: PF10592
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiU # AbiU
...@@ -50,14 +52,3 @@ AbiU systems were experimentally validated using: ...@@ -50,14 +52,3 @@ AbiU systems were experimentally validated using:
A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005) A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect against 936, c2, P335 (Chopin et al., 2005)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
---
::
content/3.defense-systems/abiv.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF18728 PFAM: PF18728
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiV # AbiV
...@@ -50,14 +52,3 @@ AbiV systems were experimentally validated using: ...@@ -50,14 +52,3 @@ AbiV systems were experimentally validated using:
A system from *Lactococcus lactis* in *Lactococcus lactis* has an anti-phage effect against sk1, p2, jj50, P008, bIL170, c2, bIL67, ml3, eb1 (Haaber et al., 2008) A system from *Lactococcus lactis* in *Lactococcus lactis* has an anti-phage effect against sk1, p2, jj50, P008, bIL170, c2, bIL67, ml3, eb1 (Haaber et al., 2008)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1128/AEM.00780-08
---
::
content/3.defense-systems/abiz.md
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...@@ -9,6 +9,8 @@ tableColumns: ...@@ -9,6 +9,8 @@ tableColumns:
Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Membrane disrupting Effector: Membrane disrupting
relevantAbstracts:
- doi: 10.1023/A:1002027321171
--- ---
# AbiZ # AbiZ
...@@ -49,13 +51,3 @@ AbiZ systems were experimentally validated using: ...@@ -49,13 +51,3 @@ AbiZ systems were experimentally validated using:
A system from *Lactococcus lactis* in *Lactococcus lactis* has an anti-phage effect against Phi31.2, ul36, phi31, phi48, phi31.1, Q30, Q36, Q33, phi50, phi48 (Durmaz et al., 2007) A system from *Lactococcus lactis* in *Lactococcus lactis* has an anti-phage effect against Phi31.2, ul36, phi31, phi48, phi31.1, Q30, Q36, Q33, phi50, phi48 (Durmaz et al., 2007)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1023/A:1002027321171
- doi: 10.1128/JB.00904-06
---
::
content/3.defense-systems/aditi.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF18928 PFAM: PF18928
relevantAbstracts:
- doi: 10.1016/j.chom.2022.09.017
--- ---
# Aditi # Aditi
...@@ -57,13 +59,3 @@ Aditi systems were experimentally validated using: ...@@ -57,13 +59,3 @@ Aditi systems were experimentally validated using:
A system from *Saccharibacillus kuerlensis* in *Bacillus subtilis* has an anti-phage effect against phi105, Rho14, SPP1 (Millman et al., 2022) A system from *Saccharibacillus kuerlensis* in *Bacillus subtilis* has an anti-phage effect against phi105, Rho14, SPP1 (Millman et al., 2022)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1016/j.chom.2022.09.017
---
::
content/3.defense-systems/azaca.md
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...@@ -10,6 +10,8 @@ tableColumns: ...@@ -10,6 +10,8 @@ tableColumns:
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00271 PFAM: PF00271
relevantAbstracts:
- doi: 10.1016/j.chom.2022.09.017
--- ---
# Azaca # Azaca
...@@ -66,13 +68,3 @@ A system from *Bacillus massilioanorexius* in *Escherichia coli* has an anti-pha ...@@ -66,13 +68,3 @@ A system from *Bacillus massilioanorexius* in *Escherichia coli* has an anti-pha
A system from *Bacillus massilioanorexius* in *Bacillus subtilis* has an anti-phage effect against SBSphiC (Millman et al., 2022) A system from *Bacillus massilioanorexius* in *Bacillus subtilis* has an anti-phage effect against SBSphiC (Millman et al., 2022)
## Relevant abstracts
::relevant-abstracts
---
items:
- doi: 10.1016/j.chom.2022.09.017
---
::
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