Singularity

Bootstrap: docker
From: continuumio/miniconda3

%post
# update conda and the OS
conda update conda && \
conda upgrade --all -y && \
apt-get update && \
apt-get -y install curl && \
DEBIAN_FRONTEND=noninteractive apt-get -y upgrade && \
DEBIAN_FRONTEND=noninteractive apt-get -y autoremove && \
DEBIAN_FRONTEND=noninteractive apt-get -y clean autoclean

# download the yml file
curl https://gitlab.pasteur.fr/tru/miniconda3-python310-pytorch-cuda11.7/-/raw/main/conda-env-export.yml > conda-env-export.yml && \
conda create --name py310-pytorch --file conda-env-export.yml && \
eval "$(conda shell.bash hook)"  && \
conda activate py310-pytorch  && \
conda list --explicit > /tmp/conda-list--explicit.yml