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Véronique LEGRAND
PTV
Commits
b2ac8145
Commit
b2ac8145
authored
1 year ago
by
Veronique Legrand
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version 4.3
parent
5902dbb7
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NEWS.txt
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-4
4 additions, 4 deletions
NEWS.txt
README.md
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-3
3 additions, 3 deletions
README.md
pyproject.toml
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pyproject.toml
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8 deletions
NEWS.txt
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4
−
4
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b2ac8145
VERSION
=======
Version 4.
1.2
Version 4.
3
What's new in version 4.
1.2
?
What's new in version 4.
3
?
In this version we integrated a fix suggested by Wei Shen.
There was a regression in version 3.0 and upper: the rearranged phage sequence was no more trimmed.
...
...
@@ -13,9 +13,9 @@ This is now fixed thanks to Wei.
VERSION
=======
Version 4.
1.1
Version 4.
2
What's new in version 4.
1.1
?
What's new in version 4.
2
?
In this version, we added the possibility to provide gzipped files as input.
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README.md
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@@ -7,7 +7,7 @@ PhageTerm.py - run as command line in a shell
# VERSION
# =======
Version 4.
1.2
Version 4.
3
Compatible with python 3.9 up to 3.13
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@@ -39,13 +39,13 @@ Version 3.0.0 up to version 4.0 work with python 2.7
From version 4.0 to version 4.1, PhageTerm (now PhageTermVirome) works with python 3.7
version 4.
1.1
work
s
with python 3.9 up to python 3.13.
version 4.
2 and higher
work with python 3.9 up to python 3.13.
# PREREQUISITES
# =============
## For version 4.
2
## For version 4.
3
-
python3.9
-
poetry (https://python-poetry.org/docs/)
-
An up to date list of dependencies can be found in the pyproject.toml file.
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pyproject.toml
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[tool.poetry]
name
=
"phagetermvirome"
version
=
"4.
1.2
"
version
=
"4.
3
"
description
=
"Using sequencing bias to identify phages terminii and phage genome packaging."
authors
=
[
"Marc Monot <marc.monot@pasteur.fr>"
,
"Julian Garneau <julian.garneau@unil.ch>"
,
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