- Apr 02, 2021
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Maximilian Press authored
* changes to unit-tests/test_functions_PhageTerm_for_multi.test_checkpoint_creation() accommodating that the first read is now considered. e.g. total match length goes from 291333 --> 291441 due to first read length of 108. * minor restructure of unit tests to include standard setUp() and tearDown() methods, simplifying the creation/deletion of tmp dirs. This means that the unit tests don't fail if they detect leftover tmp directories leftover from a previous run that didn't cleanup because it failed.
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- Nov 23, 2020
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Veronique Legrand authored
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- Oct 27, 2020
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Veronique Legrand authored
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Veronique Legrand authored
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- Oct 23, 2020
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Veronique Legrand authored
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- Oct 20, 2020
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Veronique Legrand authored
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- Aug 26, 2020
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Maximilian Press authored
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- Aug 06, 2020
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Maximilian Press authored
I was having trouble with some pieces of code related to relative paths etc., and tracked some issues to hard-coded paths and then to the lack of a setUp/tearDown procedure in test_functions_PhageTerm_for_multi.py. I did some refactoring to make them a little easier to use and a little easier to extend.
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- Aug 05, 2020
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Maximilian Press authored
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- Aug 04, 2020
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Maximilian Press authored
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- Aug 03, 2020
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Maximilian Press authored
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- Jun 04, 2020
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Véronique LEGRAND authored
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Véronique LEGRAND authored
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- May 29, 2020
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Véronique LEGRAND authored
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- Apr 30, 2020
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Véronique LEGRAND authored
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- Apr 29, 2020
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Véronique LEGRAND authored
work in progress: trying to find a more compact way to store readsCoverage results on disk to save place in multi machine mode
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- Feb 25, 2020
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Veronique Legrand authored
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