Commit 361f9cf4 authored by Alexis  CRISCUOLO's avatar Alexis CRISCUOLO

Update README.md

parent 7598e97f
......@@ -68,7 +68,7 @@ Launch _eFASTA_ without option to read the following documentation:
## Example
The directory _example_ contains the FASTA-formatted file _Ecoli.O104H4.plsm.fna_. This file contains the three plasmid sequences pAA-EA11, pESBL-EA11 and pG-EA11 of the bacteria _Escherichia coli_ O104:H4 _str._ 2011C-3493. As a tblastn search against these plasmid sequences indicates that the region comprised between the nucleotide indexes 31400 and 31293 of pESBL-EA11 (accession number CP003291) is significantly similar to the query amino-acid sequence, _eFASTA_ could be very useful to extract this nucleotide region.
The directory _example_ contains the FASTA-formatted file _Ecoli.O104H4.plsm.fna_. This file contains the three plasmid sequences pAA-EA11, pESBL-EA11 and pG-EA11 of the bacteria _Escherichia coli_ O104:H4 _str._ 2011C-3493 (accession numbers: CP003291, CP003290 and CP003292, respectively). As a tblastn search against these plasmid sequences indicates that the region comprised between the nucleotide indexes 31400 and 31293 of CP003291 (therefore reverse-complement) is significantly similar to the query amino-acid sequence, _eFASTA_ could be very useful to extract this likely coding region.
##### Standard extraction
```bash
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment