@@ -48,12 +48,12 @@ You will need to install the required programs listed in the following table, or
...
@@ -48,12 +48,12 @@ You will need to install the required programs listed in the following table, or
</div>
</div>
<sup>
<sup> ★</sup> For some Mac OS X, it is worth noting that the default [BSD _xargs_](https://www.freebsd.org/cgi/man.cgi?xargs) does not offer all the functionalities required by _fqCleanER_.
<sup> ★</sup> For some Mac OS X, it is worth noting that the default [BSD _xargs_](https://www.freebsd.org/cgi/man.cgi?xargs) does not offer all the functionalities required by _fqCleanER_.
However, the expected [GNU _xargs_](https://www.gnu.org/software/findutils/manual/html_node/find_html/xargs-options.html)(here named `gxargs`) can be easily installed using [_homebrew_](https://brew.sh)(i.e.`brew install findutils`).
However, the expected [GNU _xargs_](https://www.gnu.org/software/findutils/manual/html_node/find_html/xargs-options.html)(here named `gxargs`) can be easily installed using [_homebrew_](https://brew.sh)(i.e.`brew install findutils`).
Of note, _fqCleanER_ first looks for the `gxargs` binary on the `$PATH`, and, if missing, for the `xargs` binary.<br>
Of note, _fqCleanER_ first looks for the `gxargs` binary on the `$PATH`, and, if missing, for the `xargs` binary.<br>
<sup> ✦</sup> When compiling the source code of [_Musket_](https://musket.sourceforge.net/homepage.htm#installation), it is recommended to edit its _Makefile_ to increase the value of the macro `MAX_SEQ_LENGTH` (e.g. 1000) in order to avoid any problem during the execution of _fqCleanER_.
<sup> ✦</sup> When compiling the source code of [_Musket_](https://musket.sourceforge.net/homepage.htm#installation), it is recommended to edit its _Makefile_ to increase the value of the macro `MAX_SEQ_LENGTH` (e.g. 1000) in order to avoid any problem during the execution of _fqCleanER_.