more plots

Snakefile

@@ -8,7 +8,9 @@ rule combine_tables:
 	output:
 		table="{folder}/final_table.csv",
 		swarm_plot="{folder}/swarm_plot.png",
-		prob_plot="{folder}/prob_plot.png"
+		swarm_plot_int="{folder}/swarm_plot_intensities.png",
+		prob_plot="{folder}/prob_plot.png",
+		prob_plot_log="{folder}/prob_plot_log.png"
 	shell:
 		"python merge_tables.py {input.table1} {input.table2} {output.table} {output.swarm_plot} {output.prob_plot} {params.threshold}"