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Andrey ARISTOV
nd2shrink
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# nd2 to tif conversion tools
## Installation
1.
Download and install
[
miniconda3
](
https://docs.conda.io/en/latest/miniconda.html
)
2.
Create new environment with python 3.8
-
`conda create -n nd2 python=3.8`
-
`conda activate nd2`
3.
Install the package
`pip install -U git+https://gitlab.pasteur.fr/aaristov/nd2shrink.git`
## Compress nd2 to tif with 4x binning and 16 to 8 bits conversion
### Use:
@@ -10,7 +19,7 @@
### Use
`python -m nd2_combine folder`
`python -m nd2_combine
path_to_
folder`
#### Input:
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