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Amandine PERRIN
pipeline_annotation
Commits
53a1617d
Commit
53a1617d
authored
Jul 30, 2020
by
Amandine PERRIN
Browse files
add prodigal to docker image for tests
parent
bbba30b4
Pipeline
#34842
passed with stage
in 11 minutes and 22 seconds
Changes
1
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for_tests/Dockerfile
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53a1617d
...
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@@ -41,6 +41,14 @@ RUN wget https://github.com/tseemann/barrnap/archive/0.8.tar.gz &&\
# Remove heavy useless files
rm -r /tmp/barrnap-0.8/examples /tmp/barrnap-0.8/build/*.aln
# Install prodigal
WORKDIR
/tmp
RUN
wget https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz
&&
\
tar
-xzf
v2.6.3.tar.gz
&&
\
rm
v2.6.3.tar.gz
WORKDIR
/tmp/Prodigal-2.6.3
RUN
make
&&
\
make
install
# Install prokka:
WORKDIR
/tmp
...
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