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Amandine PERRIN
pipeline_annotation
Commits
e1f898b7
Commit
e1f898b7
authored
Oct 03, 2019
by
Amandine PERRIN
Browse files
Add mash installation
parent
0ecf5112
Pipeline
#15708
failed with stage
in 7 minutes and 1 second
Changes
1
Pipelines
1
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for_tests/Dockerfile
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e1f898b7
from
ubuntu:
latest
from
ubuntu:
18.04
# Update apt-get packages
RUN
apt-get update
&&
\
...
...
@@ -14,6 +14,15 @@ RUN apt-get install -y \
RUN
pip3
install
--upgrade
pip
# Install mash
WORKDIR
/tmp
RUN
wget https://github.com/marbl/Mash/releases/download/v2.2/mash-Linux64-v2.2.tar
&&
\
tar
-xf
mash-Linux64-v2.2.tar
&&
\
rm
mash-Linux64-v2.2.tar
&&
\
mv
/tmp/mash-Linux64-v2.2/mash /usr/local/bin
&&
\
rm
-r
mash-Linux64-v2.2
# Install barrnap
WORKDIR
/tmp
RUN
wget https://github.com/tseemann/barrnap/archive/0.8.tar.gz
&&
\
...
...
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