Commits · cf9dd3000e07e83db2edce2d34e078bf96fa99f4 · Amandine PERRIN / pipeline_annotation

09 Apr, 2019 1 commit
- build image with prokka and quicktree · cf9dd300
  Amandine PERRIN authored Apr 09, 2019
  
  cf9dd300
08 Apr, 2019 3 commits
- build docker image for tests · ffb8f45f
  Amandine PERRIN authored Apr 08, 2019
  
  ffb8f45f
- Build test image · dc3970cf
  Amandine PERRIN authored Apr 08, 2019
  
  dc3970cf
- change quicktree to fasttree to see if smaller size of docker image · f6c57c40
  Amandine PERRIN authored Apr 08, 2019
  
  f6c57c40
04 Apr, 2019 1 commit
- rebuid image with latest mmseqs version · f0918112
  Amandine PERRIN authored Apr 04, 2019
  
  f0918112
02 Apr, 2019 1 commit
- rebuild ubuntu image with pip3 upgrade · 8fb0b665
  Amandine PERRIN authored Apr 02, 2019
  
  8fb0b665
14 Feb, 2019 9 commits
- build only mmseqs-fastme image · 5580b373
  Amandine PERRIN authored Feb 14, 2019
  
  5580b373
- build only mafft image · 895ac23f
  Amandine PERRIN authored Feb 14, 2019
  
  895ac23f
- build only annote-and-quicktree · 5fdb8f47
  Amandine PERRIN authored Feb 14, 2019
  
  5fdb8f47
- build only annote-quicktree and ubuntu images · c401d62c
  Amandine PERRIN authored Feb 14, 2019
  
  c401d62c
- add build barrnap image · baf258d3
  Amandine PERRIN authored Feb 14, 2019
  
  baf258d3
- build only test image · 76021921
  Amandine PERRIN authored Feb 14, 2019
  
  76021921
- Less 'RUN' steps for annote-quicktree image · d87db16d
  Amandine PERRIN authored Feb 14, 2019
  
  d87db16d
- add installation of git for mmseqs-and-fastme image · e15848c1
  Amandine PERRIN authored Feb 14, 2019
  
  e15848c1
- Remove useless images. · bdc5319f
  Amandine PERRIN authored Feb 14, 2019
```
- 5 images are built to test installation script
- 1 image is built containing all dependencies, to use to run unit and functional tests
```
  bdc5319f
12 Feb, 2019 5 commits
- also create image for tests · fef5849a
  Amandine PERRIN authored Feb 12, 2019
  
  fef5849a
- test only nuid for mafft only and ubuntu · fecbf0ec
  Amandine PERRIN authored Feb 12, 2019
  
  fecbf0ec
- remove redundancy in docker image names · 82d1288c
  Amandine PERRIN authored Feb 12, 2019
  
  82d1288c
- Add new docker images build to gitlab ci · 551e59fd
  Amandine PERRIN authored Feb 12, 2019
  
  551e59fd
- add new machines to test installation · 0553c2d9
  Amandine PERRIN authored Feb 12, 2019
  
  0553c2d9
11 Jan, 2018 6 commits
- Install pip3 on ubuntu · fe2fe4e3
  Amandine PERRIN authored Jan 11, 2018
  
  fe2fe4e3
- from latest ubuntu · 82daa743
  Amandine PERRIN authored Jan 11, 2018
  
  82daa743
- add dockerfile for ubuntu · 5dc043d0
  Amandine PERRIN authored Jan 11, 2018
  
  5dc043d0
- buid -> build · 867dc266
  Amandine PERRIN authored Jan 11, 2018
  
  867dc266
- create new image, with only ubuntu, and python and git · ea199e28
  Amandine PERRIN authored Jan 11, 2018
  
  ea199e28
- Small typo · 43beed7d
  Amandine PERRIN authored Jan 11, 2018
  
  43beed7d
10 Jan, 2018 2 commits
- remove mafft install from bioperl · 8986fa0a
  Amandine PERRIN authored Jan 10, 2018
  
  8986fa0a
- Remove mafft installed by bioperl · ba440569
  Amandine PERRIN authored Jan 10, 2018
  
  ba440569
13 Dec, 2017 4 commits
- remove ls · 265eb1ea
  Amandine PERRIN authored Dec 13, 2017
  
  265eb1ea
- Show content in directory at the end of task · dbdd3ed0
  Amandine PERRIN authored Dec 13, 2017
  
  dbdd3ed0
- test without 'git co master -- requirements.txt' · a359a276
  Amandine PERRIN authored Dec 13, 2017
  
  a359a276
- Add image with quicktree installed · e1248849
  Amandine PERRIN authored Dec 13, 2017
  
  e1248849
08 Dec, 2017 2 commits
- Install fastme and quicktree in docker image for tests · 7732346d
  Amandine PERRIN authored Dec 08, 2017
  
  7732346d
- Add FastTreeMP installation · 3f740c94
  Amandine PERRIN authored Dec 08, 2017
  
  3f740c94
27 Nov, 2017 2 commits
- don't remove useless files for barrnap only docker · 2b671971
  Amandine PERRIN authored Nov 27, 2017
  
  2b671971
- Add mafft installation · 05012845
  Amandine PERRIN authored Nov 27, 2017
  
  05012845
16 Aug, 2017 4 commits
- no need to install sphinx, as it is now in requirements.txt · 5e793324
  Amandine PERRIN authored Aug 16, 2017
  
  5e793324
- image name in lower case · fb645210
  Amandine PERRIN authored Aug 16, 2017
  
  fb645210
- Use different image names instead of tags only: also when pushing to gitlab registry · 2adad659
  Amandine PERRIN authored Aug 16, 2017
  
  2adad659
- Use different image names instead of tags only · bb524b94
  Amandine PERRIN authored Aug 16, 2017
  
  bb524b94