remove mafft install from bioperl

for_build/annote_and_1tree/Dockerfile

@@ -25,9 +25,11 @@ RUN git clone https://github.com/tseemann/prokka.git
 RUN /tmp/prokka/bin/prokka --setupdb
 RUN ln -s /tmp/prokka/bin/prokka /usr/local/bin
 
+RUN rm /usr/bin/mafft  # remove mafft installed with bioperl
+
 # Install quicktree
 WORKDIR /tmp
 RUN git clone https://github.com/tseemann/quicktree
 WORKDIR quicktree
 RUN make &&\
-    ln -s /tmp/quicktree/quicktree /usr/local/bin
\ No newline at end of file
+    ln -s /tmp/quicktree/quicktree /usr/local/bin

for_build/barrnap_only/Dockerfile

@@ -24,3 +24,5 @@ RUN wget https://github.com/tseemann/barrnap/archive/0.8.tar.gz &&\
     tar -xf 0.8.tar.gz &&\
     rm 0.8.tar.gz
 RUN ln -s /tmp/barrnap-0.8/bin/barrnap /usr/local/bin
+
+RUN rm /usr/bin/mafft  # remove mafft installed with bioperl
\ No newline at end of file

for_build/basics/Dockerfile

@@ -17,3 +17,5 @@ RUN apt-get install -y \
 
 # Update pip
 RUN pip3 install --upgrade pip
+
+RUN rm /usr/bin/mafft  # remove mafft installed with bioperl
\ No newline at end of file

for_build/prokka_only/Dockerfile

@@ -24,3 +24,5 @@ RUN apt-get install -y\
 RUN git clone https://github.com/tseemann/prokka.git
 RUN /tmp/prokka/bin/prokka --setupdb
 RUN ln -s /tmp/prokka/bin/prokka /usr/local/bin
+
+RUN rm /usr/bin/mafft  # remove mafft installed with bioperl