Commit 8ddf5ca7 authored by Blaise Li's avatar Blaise Li
Browse files

Merge branch 'master' of gitlab.pasteur.fr:bli/bioinfo_utils

parents fc2f3556 d55ce316
VERSION := $(shell git log | head -1 | cut -d " " -f2)
ifeq ($(PREFIX),)
PREFIX := /opt/bioinfo_utils_$(VERSION)
PREFIX := /opt/bioinfo_utils
endif
install: all
install -d $(PREFIX)/bin
install run_pipeline $(PREFIX)/bin/.
install run_pipeline.sh $(PREFIX)/bin/.
install -d $(PREFIX)_$(VERSION)/bin
install run_pipeline $(PREFIX)_$(VERSION)/bin/.
install run_pipeline.sh $(PREFIX)_$(VERSION)/bin/.
for datatype in sRNA-seq smallRNA-seq RNA-seq GRO-seq PRO-seq Degradome-seq Ribo-seq iCLIP-seq iCLIP; \
do \
ln -s $(PREFIX)/bin/run_pipeline.sh $(PREFIX)/bin/run_$${datatype}_pipeline; \
ln -sf $(PREFIX)_$(VERSION)/bin/run_pipeline.sh $(PREFIX)_$(VERSION)/bin/run_$${datatype}_pipeline; \
done
ln -sf $(PREFIX)_$(VERSION) $(PREFIX)
all: run_pipeline
......
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