Commits · master · Blaise LI / bioinfo_utils

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Mar 05, 2021
- Accept methods outputs and genome config file. · 08f6f523
  Blaise Li authored 4 years ago
  
  08f6f523
Jul 29, 2020
- Minor update in processing steps description. · 04148644
  Blaise Li authored 5 years ago
  04148644
Jul 27, 2020
- Take results info from results folder. · 65a81e94
  Blaise Li authored 5 years ago
  65a81e94
- Allow empty libraries sections. · 1adbd411
  Blaise Li authored 5 years ago
  
  1adbd411
- Find duplicates between more than one submission. · 7b983ae5
  Blaise Li authored 5 years ago
  
  7b983ae5
Jul 24, 2020
- Script to find common files between submissions. · 19e9b741
  Blaise Li authored 5 years ago
  
  19e9b741
Jul 16, 2020
- Fix data preparation pipeline. · 1196431e
  Blaise Li authored 5 years ago
  
  1196431e
Jul 15, 2020
- Insert library in dicts with file info. · 753d3f63
  Blaise Li authored 5 years ago
  753d3f63
Jul 11, 2020
- Add debugging output to build_file_dicts.py · 8efd4ba6
  Blaise Li authored 5 years ago
  
  8efd4ba6
Jul 08, 2020
- Update tool versions in submission metadata. · 74c39e2a
  Blaise Li authored 5 years ago
  
  74c39e2a
- Add Ribo-seq to possible submitted library types. · 8941f170
  Blaise Li authored 5 years ago
  
  8941f170
Jul 07, 2020
- Data submission pipeline can do raw data only. · 4bdc7747
  Blaise Li authored 5 years ago
  4bdc7747
- Added Ribo-seq section in libtype_info.yaml. · 45240bb6
  Blaise Li authored 5 years ago
  45240bb6
Sep 30, 2019
- Fix yaml format for libtype_info.yaml · 45c23c03
  Blaise Li authored 5 years ago
  
  45c23c03
Feb 01, 2019
- More processing steps description in libtype_info · 4d347b18
  Blaise Li authored 6 years ago
  
  4d347b18
Jan 21, 2019
- Documented processing steps for data submission. · 0e65d698
  Blaise Li authored 6 years ago
  0e65d698
Dec 14, 2018
- Read lengths should not come from first read. · 06e5b121
  Blaise Li authored 6 years ago
  06e5b121
- Some checks about libraries sharing raw data. · a7b7156a
  Blaise Li authored 6 years ago
  
  a7b7156a
Dec 04, 2018
- sRNA TeX graph and data submission updated. · 490bee84
  Blaise Li authored 6 years ago
  490bee84
Nov 02, 2018
- Information about library types in common yaml. · 8b47811e
  Blaise Li authored 6 years ago
  
  8b47811e
- Gather bigwig files for submission, more raw info. · 5060d778
  Blaise Li authored 6 years ago
  
  5060d778
Oct 25, 2018
- Groups of links per analysis, other improvements. · 4fb8a6f1
  Blaise Li authored 6 years ago
  4fb8a6f1
Oct 12, 2018
- Snakefile to prepare data submission. · 5704975c
  Blaise Li authored 6 years ago
  5704975c