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Blaise LI
libsnp
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Team
5 months ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
c5e996ea
· Add options to tweak dendrogram orientation.
5 months ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
b2b4d99b
· Add Scipy citation for dendrogram building.
10 months ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
2a86ee9b
· Don't check depth coherence by default.
10 months ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
90bf73db
· Allow non-biallelic variants.
10 months ago
Blaise LI
@bli
pushed new tag
0.2.1
at
Blaise LI /
libsnp
10 months ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
1dafbdbb
· Optional extra annotations as index columns.
10 months ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
ea8b3038
· Update copyright years.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
6848c103
· MNPs not skipped any more. Option to allow others.
1 year ago
Blaise LI
@bli
pushed new tag
0.2.0
at
Blaise LI /
libsnp
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
8e5525fc
· Cannot deal with None as dict.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
d3066011
· More missing dependencies.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
fe842b78
· Add scipy dependency and ruff settigs.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
733244a7
· Add options to do "partial" PCA.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
2ccb3b67
· Added code to plot PCA, and methods.
1 year ago
Blaise LI
@bli
pushed new tag
0.1.4
at
Blaise LI /
libsnp
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
cc2c90a2
· Added function to compute freq-based pseudo-FSTs.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
60d23100
· Testing logging
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
542ccaa3
· Add wrappper function to perform PCA.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
282a00d1
· Add function to make and plot freq-based tree.
1 year ago
Blaise LI
@bli
pushed to branch
main
at
Blaise LI /
libsnp
8fc02be1
· Revert "Tryng to fix KeyError."