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Code and data for the article by Paireau et al. "An ensemble model based on early predictors to forecast COVID-19 healthcare demand in France"

This repository is tied to project #17289 submitted by Prof. Anna-Bella Failloux. It will host all the developments around that project to help replicate the results from the article.

Sources for the server running at http://hub05.hosting.pasteur.fr/NMD_complexes/ Allows exploration of interactions around NMD complexes (Dehecq et al., EMBOJ 2018)

Pipeline to run CMS in large-scale analyses

pipeline nextflow

Course material for the part about R and RStudio of the PhD course.