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This library contains the functions to convert TensorFlow 1 tensors into Icy sequences and viceversa. This library is compatible with TensorFlow versions up to 1.15
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IAH public / DeProj
BSD 3-Clause "New" or "Revised" LicenseDeprojection of a 2D segmentation onto a 2.5D mesh
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gem / spot_ICE
GNU General Public License v3.0 onlyscript that makes a visual representation of a spot containing ICE.
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Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.
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Statistical-Genetics / jass
MIT LicenseA web interface for the Joint Analysis of GWAS Summary Statistics.
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4DUnit / Tracked-nuclear neighbor analyzer
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Bioimage Analysis / Plugin template
GNU General Public License v3.0 onlyTemplate to create new Icy plugin (POM file and base plugin class)
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Bioimage Analysis / Workbooks
GNU General Public License v3.0 onlyToolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software
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Johann Dreo / qcluster
GNU Affero General Public License v3.0Updated -
Nicolas MAILLET / rpg
GNU General Public License v3.0 or laterRapid Peptides Generator (RPG) is a software dedicated to predict proteases-induced cleavage sites on amino acid sequences.
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Gael MILLOT / 12231_rogge
GNU General Public License v3.0 or laterUpdated -
Gaëlle LETORT / DeXtrusion
BSD 3-Clause "New" or "Revised" LicenseAutomatic detection of epithelial cell events as cell extrusion
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