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IdA Public / Zellige-core
BSD 2-Clause "Simplified" LicenseUpdated -
Icy is an open community platform for bioimage informatics
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Bioimage Analysis / Plugin template
GNU General Public License v3.0 onlyTemplate to create new Icy plugin (POM file and base plugin class)
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Bioimage Analysis / TensorFlow Manager
GNU General Public License v3.0 onlyThe TensorFlow library manager plugin. This plugin allows users to choose the TF version to be used on runtime
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Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.
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Bioimage Analysis / Icy / Extensions / Spot Detector
GNU General Public License v3.0 onlySpot detector plugin for Icy
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Bioimage Analysis / Icy / Extensions / HK-Means
GNU General Public License v3.0 onlyHK-Means plugin for Icy
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Bioimage Analysis / Icy / Extensions / Track Manager
GNU General Public License v3.0 onlyTrack Manager plugin for Icy
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Bioimage Analysis / Icy / Extensions / Active Contours
GNU General Public License v3.0 onlyActive Contours plugin for Icy
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Bioimage Analysis / Icy / Extensions / Workbooks
GNU General Public License v3.0 onlyToolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software
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IAH public / LocalZProjector
BSD 3-Clause "New" or "Revised" LicenseLocal z-projection via the determination of a plane of reference.
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Bioimage Analysis / Intensity Projection
GNU General Public License v3.0 onlyIntensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.
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Bioimage Analysis / FFT
GNU General Public License v3.0 onlyFast Fourier Transform Plugin for Icy
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Bioimage Analysis / RandomGenerators
GNU General Public License v3.0 onlyThis project is dedicated to protocol blocks generating random objects:
doubles integers subimagesUpdated