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Running Jazayeri Simulations on Floelling Experiments

Assembling SSU

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.

random files to ease the use of CentOS locally

Estimating standard descriptive statistics from contig sequences

Estimating pairwise OGRIs between genomes (ANI, AAI, POCP, ...)

my . * files

Restriction-modification scripts and profiles by Pedro Oliveira

Singularity bootstrap files

import from github

COG annotation of CDS

MeRIP-Seq pipeline analysis for m6a methylation site detection Author: Christophe Bécavin, Hub Bioinformatic and Biostatistic, Institut Pasteur