Explore projects

You can find here the scripts corresponding to this paper: "A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach"

Pipeline to run CMS in large-scale analyses

Fast greedy clustering of genomes based on minhash similarity

Utilities to make stats and plots from reads.

https://github.com/dialvarezs/alphafold

Yet Another Contig Ordering

Shiny app for the analysis of single cell data

metagenomics pipeline on maestro

Open source code for AlphaFold.