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Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.

random files to ease the use of CentOS locally

my . * files

Restriction-modification scripts and profiles by Pedro Oliveira

Singularity bootstrap files

Estimating pairwise OGRIs between genomes (ANI, AAI, POCP, ...)

Computing the probability that a phylogenetic tree is the result of a Yule process

import from github

COG annotation of CDS

scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)

Estimating Genome Medoid