Explore projects

Pipeline to run CMS in large-scale analyses

Fast distance-based phylogenetic inference from unaligned genome sequences

You can find here the scripts corresponding to this paper: "A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach"

using Google Chrome with singularity

sPYce is a since cell and single nucleus ATAC-seq integration method across different species implemented in Python.

ID-based RAG FastAPI: Integration with Langchain and PostgreSQL/pgvector

Pipeline to run CMS in large-scale analyses

Bioinformatics and Genome Analyses 2017 - http://meetings.embo.org/event/17-genome

Previous events: http://webext.pasteur.fr/tekaia/BGA_courses.html

LILAMS - Leucine Isotopic Labeling Analysis by MALDI-TOF mass Spectrometry was a Python software project to perform quantitative data analysis on mass spectrometry results for proteins labeled with heavy amino acids. Historical archive.

Finding Repeats Using BLAST

https://bbrancot.pages.pasteur.fr/prog-web-client-server/

A web site for indeep

Utilities to make stats and plots from reads.