Explore projects

A web site for indeep

Downloading genome assembly files from GenBank or RefSeq

Course material for the part about R and RStudio of the PhD course.

Smith-Waterman-based Average Nucleotide Identity

Maestro Cluster documentation

Utilities to collapse reads in bam files to their 5' end

Serratus project, read downloader using AWS Batch

Shiny app for the analysis of single cell data

Some helpers for my HTS snakemake workflows.

Some helpers for HTS data analyses.

Some helpers to call DESeq2 using rpy2 in python.

Defining small RNAs in C. elegans.