Explore projects

You can find here the scripts corresponding to this paper: "A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach"

mini-contig de novo assembly from long-read data

Estimating Genome Medoid

Estimating standard descriptive statistics from FASTQ files

Fast greedy clustering of genomes based on minhash similarity

https://github.com/dialvarezs/alphafold

FASTQ summary

Pasteur Course on Integrative Structural Biology (ISB2017)

Singularity bootstrap files

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

Computing the probability that a phylogenetic tree is the result of a Yule process