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Evolutionary Contact wrapper for ARIA software

Individual-based model of P. vivax transmission

Code and data for the article "Integrating information from historical data into epidemic forecast: Application to influenza in France" by Alessio Andronico, Juliette Paireau and Simon Cauchemez

Code and data for the article by Paireau et al. "An ensemble model based on early predictors to forecast COVID-19 healthcare demand in France"

Estimating standard descriptive statistics from FASTQ file

openbabel rpm recipes for iPPI-DB. 2.4.1 is too old and buggy on fingerprints and tanimoto, so until the next release we use custom rpms